Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813499.1_cds_XP_016497552.1_11669
CDS Infomation

[gene=LOC107816359] [db_xref=GeneID:107816359] [protein=programmed cell death protein 2-like isoform X2] [protein_id=XP_016497552.1] [location=complement(join(30934..31104,31278..31392,31534..31604,31680..31828,31960..32053,32122..32210,32341..32438,32544..32677,32993..33076,33180..33425))] [gbkey=CDS]
Sequence

ATGGATGAAGAAATTAATGCTACAAAAAGCATGAGGAGCTTGCAAATTACTCTTCGTGAT
GAGGAAGATGAAATTGATGATAGTGGAGAAGTTAATTCATATGATGATGATGATGATGAT
GATGATGATGATGTTGAAGAGGAGGATGAAGAGAAAGAACCTGTGGGATTAGGGGTTCTT
GAAAAGCCCGAGAATTCATGGTCACTGCGACGTGAGCTATTTCCAAGCAAAGCTGGGGGT
ACTCCTGCTTGGTTGGATCCAGTTAACTTGCCAACAGGGAGATCATGTCTTTGCGATTTC
TGTGCCGAGCCTTTGCAGTTCATGCTTCAGGTTTATGCACCACTCACTGAGAAGGATTCT
ACTTTTCATCGTACCTTATTTCTCTTCATGTGCACATCAATGGCCTGTCTCCTTAAAGAC
CAACACGAGCAGTGGAAAAGGAACCAAGTCAAGCCATCCAGGAGTGTCAAGGTCTTCTGT
TGCCAATTGCCCCGTAATAACTCTTTTTACTCCAGTGAGCCCCCAAGAAACAATGGGAAA
GATAAACCTTCTAGAGCTGGAGCTGTTCTTTGTGGTTGGTGTGGTACCTGGAAAGGAGAT
AAAGTTTGTGGTGGTTGCAGAAGAGCACATTACTGCTCTGAGAAACACCAGGCTGTTCAT
TGGAAATCAGGTCATAAAAGACGCTGTTTACCACTGGAAGCATCTGAATCTAGCAATAAT
TGGACTGTTGGGGAGATGCAAGAAGTTGCAAGCAATAGTCTGTGGCCTGAGTATGAGATT
GCAATTACTGATGAGTGTGAGGATAAGATCTCTGATGATAACGGAGAACTGAACTCATTG
ATTTCTTCAAGCCGAGTGGATGAATCGATTGAATCACTTATAGACAGCTTTGAGGGGGAA
GATGACAAGAAGAGTTGGGCATCTTTCCAGGAGAGGATATCCCGTACCCCTGAGCAAGTA
TTAAGGTATTACAGAGATGCTGGAGCAAAACCATTATGGCCAATGTCAAGTGGCCAGCCA
TCAAAGGCTGAGATTCCTAAATGCAGCTATTGTGGTGGCCGTAGGGTATTTGAGTTTCAG
GTTTTACCACAAGTACTCTATTATTTTGGTGTGGAAAATGATGTTAATTCTCTTGACTGG
GCTACTATTGCTGTTTACACCTGTGAAGCCTCGTGTGATGGAAGTATGGCTTACAAAGAG
GAGTTTGTTTGGGTTCAAATTGCATCTCAATCAAGTACAACGCACAGATAA

Peptide Sequence

PEP ID

XP_016497552.1
PEP Infomation

PREDICTED: programmed cell death protein 2-like isoform X2 [Nicotiana tabacum]
Sequence

MDEEINATKSMRSLQITLRDEEDEIDDSGEVNSYDDDDDDDDDDVEEEDEEKEPVGLGVL
EKPENSWSLRRELFPSKAGGTPAWLDPVNLPTGRSCLCDFCAEPLQFMLQVYAPLTEKDS
TFHRTLFLFMCTSMACLLKDQHEQWKRNQVKPSRSVKVFCCQLPRNNSFYSSEPPRNNGK
DKPSRAGAVLCGWCGTWKGDKVCGGCRRAHYCSEKHQAVHWKSGHKRRCLPLEASESSNN
WTVGEMQEVASNSLWPEYEIAITDECEDKISDDNGELNSLISSSRVDESIESLIDSFEGE
DDKKSWASFQERISRTPEQVLRYYRDAGAKPLWPMSSGQPSKAEIPKCSYCGGRRVFEFQ
VLPQVLYYFGVENDVNSLDWATIAVYTCEASCDGSMAYKEEFVWVQIASQSSTTHR

Transcript Sequence

Gene sequence data has not been registered.